limix.stats.lrt_pvalues

limix.stats.lrt_pvalues(null_lml, alt_lmls, dof=1)[source]

Compute p-values from likelihood ratios.

These are likelihood ratio test p-values.

Parameters

  • null_lml (float) – Log of the marginal likelihood under the null hypothesis.

  • alt_lmls (array_like) – Log of the marginal likelihoods under the alternative hypotheses.

  • dof (int) – Degrees of freedom.

Returns

pvalues – P-values.

Return type

ndarray